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fmichel [2025/02/23 00:04]
fmichel [Creation/publication of datasets]
fmichel [2025/04/01 11:34] (current)
fmichel [Open Data: creation/publication of open datasets]
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 ===== Open Data: creation/​publication of open datasets ===== ===== Open Data: creation/​publication of open datasets =====
 +
 +Here are some open datasets for which I participated to the creation and/or publication.
  
 **ISSA Agritrop Dataset**, Semantic index of the Agritrop open scientific archive. **ISSA Agritrop Dataset**, Semantic index of the Agritrop open scientific archive.
 [[https://​github.com/​issa-project/​issa-pipeline|github]] [[https://​doi.org/​10.5281/​zenodo.10381606|DOI]] [[https://​github.com/​issa-project/​issa-pipeline|github]] [[https://​doi.org/​10.5281/​zenodo.10381606|DOI]]
  
-**TAXREF-LD**,​ Linked Data knowledge graph of the French taxonomic register. Franck MICHEL, Catherine FARON, Sandrine TERCERIE, Olivier GARGOMINY. 2017(2022. [[https://​github.com/​frmichel/​taxref-ld/​|github]] [[http://​taxref.mnhn.fr/​sparql|sparql]] [[https://​hal.archives-ouvertes.fr/​hal-01617708|article]] [[https://​doi.org/​10.5281/​zenodo.5876775|DOI]]+**TAXREF-LD**,​ Linked Data knowledge graph of the French taxonomic register. 2017-2024. [[https://​github.com/​frmichel/​taxref-ld/​|github]] [[http://​taxref.mnhn.fr/​sparql|sparql]] [[https://​hal.archives-ouvertes.fr/​hal-01617708|article]] [[https://​doi.org/​10.5281/​zenodo.5876775|DOI]]
  
-**Covid-on-the-Web**. ​Franck Michel, Fabien Gandon, Valentin Ah-Kane, Anna Bobasheva, Elena Cabrio, Olivier Corby, RaphaĆ«l Gazzotti, Alain Giboin, Santiago Marro, Tobias Mayer, Mathieu Simon, Serena Villata, Marco Winckler. 2020. [[https://​github.com/​Wimmics/​CovidOnTheWeb|github]] [[https://​covidontheweb.inria.fr/​sparql|sparql]] [[https://​hal.archives-ouvertes.fr/​hal-02939363|article]] [[https://​doi.org/​10.5281/​zenodo.4247134|DOI]].+**Covid-on-the-Web**. ​Knowledge graph produced by processing the scholarly articles of the COVID-19 Open Research Dataset (CORD-19). 2020. [[https://​github.com/​Wimmics/​CovidOnTheWeb|github]] [[https://​covidontheweb.inria.fr/​sparql|sparql]] [[https://​hal.archives-ouvertes.fr/​hal-02939363|article]] [[https://​doi.org/​10.5281/​zenodo.4247134|DOI]].
  
 **WASABI RDF Knowledge Graph**. ​ **WASABI RDF Knowledge Graph**. ​
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 **WheatGenomicsSLKG**,​ Wheat Genomics Scientific Literature Knowledge Graph. 2023. [[https://​github.com/​Wimmics/​WheatGenomicsSLKG|github]] [[http://​weakg.i3s.unice.fr/​sparql|sparql]] [[https://​doi.org/​10.5281/​zenodo.10410742|DOI]] **WheatGenomicsSLKG**,​ Wheat Genomics Scientific Literature Knowledge Graph. 2023. [[https://​github.com/​Wimmics/​WheatGenomicsSLKG|github]] [[http://​weakg.i3s.unice.fr/​sparql|sparql]] [[https://​doi.org/​10.5281/​zenodo.10410742|DOI]]
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 +**Wheat Observations Knowledge Graph**. Soft wheat phenotype observations data including the result of observation campaigns carried out on micro-parcels located in France between 1999 and 2015. Relies on the Plant Phenotype Experiment Ontology (PPEO) and the CO_321 Wheat Crop Ontology. 2024. [[https://​doi.org/​10.57745/​FSWNRS|DOI]]
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 +**Number of public photos uploaded to Flickr from 2004 to 2021**. This dataset reports the number of photos uploaded to Flickr every day, hour by hour (CET) from 2004 to 2021. Only public photos are considered, private photos as well as other type of material (e.g. videos) are not accounted for.
 +[[https://​doi.org/​10.5281/​zenodo.6536164|DOI]] [[https://​github.com/​frmichel/​flickr-statistics|github]]
  
 ===== Software Development ===== ===== Software Development =====
  
 **ISSA visualization and search web application**:​ Franck MICHEL, Youssef Mekouar (2022). **ISSA visualization and search web application**:​ Franck MICHEL, Youssef Mekouar (2022).
-Github: [[https://​github.com/​issa-project/​web-visualization/​|visu]] and [[https://​github.com/​issa-project/​web-backend/​|backend]]+Visualization: [[https://​github.com/​issa-project/​web-visualization/​|github]] [[https://​doi.org/​10.5281/​zenodo.10450607|DOI]]. Backend: ​[[https://​github.com/​issa-project/​web-backend/​|github]] [[https://​doi.org/​10.5281/​zenodo.10450633|DOI]]
  
 **ISSA Processing Pipeline**: Anna Bobasheva, Franck MICHEL (2022). **ISSA Processing Pipeline**: Anna Bobasheva, Franck MICHEL (2022).
 [[https://​github.com/​issa-project/​issa-pipeline|github]] [[https://​github.com/​issa-project/​issa-pipeline|github]]
 [[https://​doi.org/​10.5281/​zenodo.10376913|DOI]] [[https://​doi.org/​10.5281/​zenodo.10376913|DOI]]
 +
 +**WheatGenomicsSLKG visualization and search web application**:​ Franck MICHEL, Youssef Mekouar (2022).
 +Visualization:​ [[https://​github.com/​Wimmics/​wheatgenomicsslkg-web-visualization/​|github]] [[https://​doi.org/​10.5281/​zenodo.10514502|DOI]]. Backend: [[https://​github.com/​Wimmics/​wheatgenomicsslkg-web-backend|github]] [[https://​doi.org/​10.5281/​zenodo.10514504|DOI]]
 +
  
 **SPARQL Micro-Services:​ Querying Web APIs with SPARQL**. Franck Michel. 2018. **SPARQL Micro-Services:​ Querying Web APIs with SPARQL**. Franck Michel. 2018.
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